ImageJ plugin - Segmenting and Tracking E. Coli


Detailed install instructions are given in the user manual. In short:

1. Download FluoBacTracker from our download page.

2. If not already installed on your computer, download ImageJ from the ImageJ download page and install it.

3 . In ImageJ

4. Open ImageJ. If need be, adjust :

5. Launch FluoBacTracker in Plugins/FluoBacTracker.

Video Tutorial

We strongly advice new users should take a look at the tutorial as an initiation.

A longer but older video tutorial for FluoBacTracker is also available here.


A user manual is downloadable here.

Sample Movies

We provide a couple of simple and short example movies that can directly be used as an application of the tutorial and manual :